Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Gm5682-201ENSMUST00000173402 505 ntBASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smchd1Q6P5D8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Gm25990-201ENSMUST00000102440 86 ntBASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smchd1Q6P5D8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Gm11780-201ENSMUST00000136880 516 ntBASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smchd1Q6P5D8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.78■□□□□ 0.44
Smchd1Q6P5D8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 Gm4535-201ENSMUST00000182274 558 ntBASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 Gm6550-201ENSMUST00000187574 993 ntBASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 Gm10355-201ENSMUST00000097146 517 ntBASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smchd1Q6P5D8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms