Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Krt42Q6IFX2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Gm12382-201ENSMUST00000122005 922 ntBASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Krt42Q6IFX2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Krt42Q6IFX2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.77■□□□□ 0.27
Krt42Q6IFX2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Krt42Q6IFX2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Krt42Q6IFX2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Krt42Q6IFX2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Krt42Q6IFX2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Krt42Q6IFX2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Krt42Q6IFX2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Gm12896-201ENSMUST00000118430 226 ntBASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Mir5133-201ENSMUST00000174955 77 ntBASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Krt42Q6IFX2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Krt42Q6IFX2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms