Protein–RNA interactions for Protein: Q62401

Ccl12, C-C motif chemokine 12, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl12Q62401 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl12Q62401 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl12Q62401 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl12Q62401 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl12Q62401 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl12Q62401 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccl12Q62401 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccl12Q62401 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccl12Q62401 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccl12Q62401 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccl12Q62401 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ccl12Q62401 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.03□□□□□ -0.32
Ccl12Q62401 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccl12Q62401 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccl12Q62401 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccl12Q62401 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccl12Q62401 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.03□□□□□ -0.32
Ccl12Q62401 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Ccl12Q62401 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccl12Q62401 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl12Q62401 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl12Q62401 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ccl12Q62401 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl12Q62401 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl12Q62401 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl12Q62401 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.02□□□□□ -0.32
Ccl12Q62401 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ccl12Q62401 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccl12Q62401 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccl12Q62401 AA414768-201ENSMUST00000121924 1257 ntBASIC13.02□□□□□ -0.33
Ccl12Q62401 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccl12Q62401 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.02□□□□□ -0.33
Ccl12Q62401 Gm18115-201ENSMUST00000221209 621 ntBASIC13.02□□□□□ -0.33
Ccl12Q62401 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccl12Q62401 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ccl12Q62401 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccl12Q62401 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccl12Q62401 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccl12Q62401 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccl12Q62401 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccl12Q62401 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.01□□□□□ -0.33
Ccl12Q62401 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccl12Q62401 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Ccl12Q62401 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccl12Q62401 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms