Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Scn9aQ62205 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn9aQ62205 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn9aQ62205 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn9aQ62205 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Scn9aQ62205 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.07■□□□□ 0.64
Scn9aQ62205 Gm45612-201ENSMUST00000211320 160 ntBASIC19.07■□□□□ 0.64
Scn9aQ62205 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Scn9aQ62205 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.07■□□□□ 0.64
Scn9aQ62205 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Scn9aQ62205 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn9aQ62205 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Scn9aQ62205 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.06■□□□□ 0.64
Scn9aQ62205 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn9aQ62205 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn9aQ62205 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.06■□□□□ 0.64
Scn9aQ62205 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn9aQ62205 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn9aQ62205 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.05■□□□□ 0.64
Scn9aQ62205 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.05■□□□□ 0.64
Scn9aQ62205 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.05■□□□□ 0.64
Scn9aQ62205 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn9aQ62205 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.05■□□□□ 0.64
Scn9aQ62205 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn9aQ62205 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Scn9aQ62205 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
Scn9aQ62205 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Scn9aQ62205 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Scn9aQ62205 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn9aQ62205 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn9aQ62205 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn9aQ62205 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn9aQ62205 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn9aQ62205 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.05■□□□□ 0.64
Scn9aQ62205 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
Scn9aQ62205 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
Scn9aQ62205 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn9aQ62205 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn9aQ62205 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn9aQ62205 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn9aQ62205 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn9aQ62205 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Scn9aQ62205 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn9aQ62205 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn9aQ62205 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn9aQ62205 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Scn9aQ62205 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn9aQ62205 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn9aQ62205 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.04■□□□□ 0.64
Scn9aQ62205 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Scn9aQ62205 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn9aQ62205 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn9aQ62205 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn9aQ62205 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scn9aQ62205 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn9aQ62205 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.03■□□□□ 0.64
Scn9aQ62205 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Scn9aQ62205 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn9aQ62205 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Scn9aQ62205 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn9aQ62205 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Scn9aQ62205 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn9aQ62205 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.03■□□□□ 0.64
Scn9aQ62205 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.03■□□□□ 0.64
Scn9aQ62205 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn9aQ62205 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.03■□□□□ 0.64
Scn9aQ62205 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn9aQ62205 Gm15427-201ENSMUST00000117288 531 ntBASIC19.02■□□□□ 0.64
Scn9aQ62205 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.02■□□□□ 0.64
Scn9aQ62205 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.02■□□□□ 0.64
Scn9aQ62205 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Scn9aQ62205 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Scn9aQ62205 Gm43438-201ENSMUST00000198133 379 ntBASIC19.02■□□□□ 0.64
Scn9aQ62205 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.02■□□□□ 0.64
Scn9aQ62205 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms