Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctr9Q62018 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ctr9Q62018 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Ctr9Q62018 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.15■□□□□ 0.66
Ctr9Q62018 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctr9Q62018 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ctr9Q62018 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctr9Q62018 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctr9Q62018 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.15■□□□□ 0.66
Ctr9Q62018 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.15■□□□□ 0.66
Ctr9Q62018 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ctr9Q62018 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctr9Q62018 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ctr9Q62018 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctr9Q62018 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctr9Q62018 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.15■□□□□ 0.66
Ctr9Q62018 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctr9Q62018 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctr9Q62018 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctr9Q62018 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Ctr9Q62018 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Ctr9Q62018 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ctr9Q62018 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ctr9Q62018 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ctr9Q62018 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ctr9Q62018 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ctr9Q62018 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.14■□□□□ 0.65
Ctr9Q62018 Gm27459-201ENSMUST00000184860 107 ntBASIC19.14■□□□□ 0.65
Ctr9Q62018 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ctr9Q62018 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.14■□□□□ 0.65
Ctr9Q62018 Gm44454-201ENSMUST00000198541 138 ntBASIC19.14■□□□□ 0.65
Ctr9Q62018 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.14■□□□□ 0.65
Ctr9Q62018 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.14■□□□□ 0.65
Ctr9Q62018 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctr9Q62018 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ctr9Q62018 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.14■□□□□ 0.65
Ctr9Q62018 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.14■□□□□ 0.65
Ctr9Q62018 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ctr9Q62018 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctr9Q62018 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctr9Q62018 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctr9Q62018 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctr9Q62018 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.13■□□□□ 0.65
Ctr9Q62018 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.13■□□□□ 0.65
Ctr9Q62018 Gm27867-201ENSMUST00000184778 125 ntBASIC19.13■□□□□ 0.65
Ctr9Q62018 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.13■□□□□ 0.65
Ctr9Q62018 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.13■□□□□ 0.65
Ctr9Q62018 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.13■□□□□ 0.65
Ctr9Q62018 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ctr9Q62018 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ctr9Q62018 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.13■□□□□ 0.65
Ctr9Q62018 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ctr9Q62018 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ctr9Q62018 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctr9Q62018 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctr9Q62018 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctr9Q62018 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctr9Q62018 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.12■□□□□ 0.65
Ctr9Q62018 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.12■□□□□ 0.65
Ctr9Q62018 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.12■□□□□ 0.65
Ctr9Q62018 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctr9Q62018 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctr9Q62018 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ctr9Q62018 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctr9Q62018 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ctr9Q62018 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctr9Q62018 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctr9Q62018 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctr9Q62018 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctr9Q62018 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ctr9Q62018 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Ctr9Q62018 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctr9Q62018 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ctr9Q62018 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms