Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.94■□□□□ 0.3
Smarcd1Q61466 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.94■□□□□ 0.3
Smarcd1Q61466 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd1Q61466 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.93■□□□□ 0.3
Smarcd1Q61466 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Gm12644-201ENSMUST00000119935 606 ntBASIC16.93■□□□□ 0.3
Smarcd1Q61466 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Birc2-201ENSMUST00000054878 378 ntBASIC16.93■□□□□ 0.3
Smarcd1Q61466 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd1Q61466 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.92■□□□□ 0.3
Smarcd1Q61466 Gm27867-201ENSMUST00000184778 125 ntBASIC16.92■□□□□ 0.3
Smarcd1Q61466 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd1Q61466 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.91■□□□□ 0.3
Smarcd1Q61466 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd1Q61466 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms