Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ift88Q61371 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.04■□□□□ 0.48
Ift88Q61371 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.04■□□□□ 0.48
Ift88Q61371 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.04■□□□□ 0.48
Ift88Q61371 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ift88Q61371 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.04■□□□□ 0.48
Ift88Q61371 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ift88Q61371 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.04■□□□□ 0.48
Ift88Q61371 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ift88Q61371 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.03■□□□□ 0.48
Ift88Q61371 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ift88Q61371 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Ift88Q61371 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ift88Q61371 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ift88Q61371 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ift88Q61371 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ift88Q61371 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ift88Q61371 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ift88Q61371 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.03■□□□□ 0.48
Ift88Q61371 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.03■□□□□ 0.48
Ift88Q61371 Mir5122-201ENSMUST00000175004 89 ntBASIC18.03■□□□□ 0.48
Ift88Q61371 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.03■□□□□ 0.48
Ift88Q61371 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ift88Q61371 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ift88Q61371 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.03■□□□□ 0.48
Ift88Q61371 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ift88Q61371 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ift88Q61371 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ift88Q61371 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ift88Q61371 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ift88Q61371 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ift88Q61371 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ift88Q61371 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.02■□□□□ 0.48
Ift88Q61371 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ift88Q61371 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ift88Q61371 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ift88Q61371 Gm44450-201ENSMUST00000199528 114 ntBASIC18.02■□□□□ 0.48
Ift88Q61371 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.02■□□□□ 0.48
Ift88Q61371 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ift88Q61371 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ift88Q61371 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.02■□□□□ 0.47
Ift88Q61371 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ift88Q61371 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ift88Q61371 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ift88Q61371 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ift88Q61371 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ift88Q61371 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.01■□□□□ 0.47
Ift88Q61371 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.01■□□□□ 0.47
Ift88Q61371 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ift88Q61371 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ift88Q61371 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ift88Q61371 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.01■□□□□ 0.47
Ift88Q61371 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ift88Q61371 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ift88Q61371 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ift88Q61371 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ift88Q61371 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ift88Q61371 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Ift88Q61371 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ift88Q61371 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ift88Q61371 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ift88Q61371 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ift88Q61371 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms