Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.44■□□□□ 0.22
Six4Q61321 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Six4Q61321 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six4Q61321 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Six4Q61321 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Six4Q61321 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Gm14859-201ENSMUST00000117752 357 ntBASIC16.43■□□□□ 0.22
Six4Q61321 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.43■□□□□ 0.22
Six4Q61321 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Gm7367-201ENSMUST00000057611 492 ntBASIC16.43■□□□□ 0.22
Six4Q61321 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six4Q61321 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Six4Q61321 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six4Q61321 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Six4Q61321 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six4Q61321 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Six4Q61321 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six4Q61321 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Six4Q61321 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six4Q61321 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Six4Q61321 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Six4Q61321 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Six4Q61321 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.41■□□□□ 0.22
Six4Q61321 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Gm21362-201ENSMUST00000194272 928 ntBASIC16.41■□□□□ 0.22
Six4Q61321 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Six4Q61321 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.41■□□□□ 0.22
Six4Q61321 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Six4Q61321 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.41■□□□□ 0.22
Six4Q61321 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six4Q61321 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.4■□□□□ 0.22
Six4Q61321 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.4■□□□□ 0.22
Six4Q61321 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Six4Q61321 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.4■□□□□ 0.22
Six4Q61321 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.4■□□□□ 0.22
Six4Q61321 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Six4Q61321 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.4■□□□□ 0.22
Six4Q61321 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.4■□□□□ 0.22
Six4Q61321 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six4Q61321 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Six4Q61321 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.4■□□□□ 0.22
Six4Q61321 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.4■□□□□ 0.22
Six4Q61321 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms