Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Mir6956-201ENSMUST00000183598 62 ntBASIC13.62□□□□□ -0.23
Hcfc1Q61191 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.62□□□□□ -0.23
Hcfc1Q61191 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.62□□□□□ -0.23
Hcfc1Q61191 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hcfc1Q61191 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Gm15920-201ENSMUST00000118998 402 ntBASIC13.61□□□□□ -0.23
Hcfc1Q61191 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Gm27494-201ENSMUST00000184735 189 ntBASIC13.61□□□□□ -0.23
Hcfc1Q61191 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Gm45167-201ENSMUST00000208007 322 ntBASIC13.61□□□□□ -0.23
Hcfc1Q61191 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.61□□□□□ -0.23
Hcfc1Q61191 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hcfc1Q61191 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Gm44335-201ENSMUST00000196879 141 ntBASIC13.6□□□□□ -0.23
Hcfc1Q61191 Gm9682-201ENSMUST00000197505 556 ntBASIC13.6□□□□□ -0.23
Hcfc1Q61191 Gm44297-201ENSMUST00000198304 141 ntBASIC13.6□□□□□ -0.23
Hcfc1Q61191 Gm44346-201ENSMUST00000198851 141 ntBASIC13.6□□□□□ -0.23
Hcfc1Q61191 Gm43125-201ENSMUST00000201724 730 ntBASIC13.6□□□□□ -0.23
Hcfc1Q61191 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hcfc1Q61191 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Gm37153-201ENSMUST00000193637 231 ntBASIC13.59□□□□□ -0.23
Hcfc1Q61191 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hcfc1Q61191 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms