Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.99□□□□□ -0.17
Clns1aQ61189 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Clns1aQ61189 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
Clns1aQ61189 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.99□□□□□ -0.17
Clns1aQ61189 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.99□□□□□ -0.17
Clns1aQ61189 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.99□□□□□ -0.17
Clns1aQ61189 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clns1aQ61189 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clns1aQ61189 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clns1aQ61189 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Clns1aQ61189 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Clns1aQ61189 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.98□□□□□ -0.17
Clns1aQ61189 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.98□□□□□ -0.17
Clns1aQ61189 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Clns1aQ61189 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clns1aQ61189 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Clns1aQ61189 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Clns1aQ61189 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Clns1aQ61189 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Clns1aQ61189 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.97□□□□□ -0.17
Clns1aQ61189 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Clns1aQ61189 Gm4968-201ENSMUST00000071458 858 ntBASIC13.97□□□□□ -0.17
Clns1aQ61189 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Clns1aQ61189 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Clns1aQ61189 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Clns1aQ61189 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Clns1aQ61189 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clns1aQ61189 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clns1aQ61189 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clns1aQ61189 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clns1aQ61189 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Clns1aQ61189 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clns1aQ61189 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clns1aQ61189 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clns1aQ61189 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clns1aQ61189 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms