Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Gm18195-201ENSMUST00000207604 706 ntBASIC20.22■□□□□ 0.83
Irf9Q61179 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf9Q61179 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf9Q61179 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf9Q61179 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Irf9Q61179 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf9Q61179 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Irf9Q61179 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Gm4459-201ENSMUST00000118750 468 ntBASIC20.21■□□□□ 0.83
Irf9Q61179 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.21■□□□□ 0.83
Irf9Q61179 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Irf9Q61179 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.21■□□□□ 0.83
Irf9Q61179 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.21■□□□□ 0.83
Irf9Q61179 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Irf9Q61179 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.21■□□□□ 0.83
Irf9Q61179 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf9Q61179 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Irf9Q61179 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Gm12497-201ENSMUST00000138778 237 ntBASIC20.2■□□□□ 0.82
Irf9Q61179 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.2■□□□□ 0.82
Irf9Q61179 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.2■□□□□ 0.82
Irf9Q61179 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Irf9Q61179 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf9Q61179 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf9Q61179 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf9Q61179 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf9Q61179 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.19■□□□□ 0.82
Irf9Q61179 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.19■□□□□ 0.82
Irf9Q61179 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Irf9Q61179 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.19■□□□□ 0.82
Irf9Q61179 Gm9172-201ENSMUST00000212092 954 ntBASIC20.19■□□□□ 0.82
Irf9Q61179 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.19■□□□□ 0.82
Irf9Q61179 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf9Q61179 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Irf9Q61179 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf9Q61179 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Irf9Q61179 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf9Q61179 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.19■□□□□ 0.82
Irf9Q61179 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Irf9Q61179 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.18■□□□□ 0.82
Irf9Q61179 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Irf9Q61179 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf9Q61179 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.18■□□□□ 0.82
Irf9Q61179 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf9Q61179 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Irf9Q61179 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Irf9Q61179 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.18■□□□□ 0.82
Irf9Q61179 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Irf9Q61179 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Irf9Q61179 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf9Q61179 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Irf9Q61179 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf9Q61179 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf9Q61179 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Irf9Q61179 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Irf9Q61179 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Irf9Q61179 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.17■□□□□ 0.82
Irf9Q61179 Gm18733-201ENSMUST00000173950 856 ntBASIC20.17■□□□□ 0.82
Irf9Q61179 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.17■□□□□ 0.82
Irf9Q61179 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Irf9Q61179 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf9Q61179 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms