Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cln3Q61124 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.81■□□□□ 0.44
Cln3Q61124 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cln3Q61124 Gm2756-201ENSMUST00000195851 400 ntBASIC17.81■□□□□ 0.44
Cln3Q61124 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cln3Q61124 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cln3Q61124 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cln3Q61124 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Cln3Q61124 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cln3Q61124 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cln3Q61124 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cln3Q61124 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cln3Q61124 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Gm27397-201ENSMUST00000184997 107 ntBASIC17.8■□□□□ 0.44
Cln3Q61124 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.8■□□□□ 0.44
Cln3Q61124 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cln3Q61124 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.8■□□□□ 0.44
Cln3Q61124 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cln3Q61124 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.8■□□□□ 0.44
Cln3Q61124 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cln3Q61124 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln3Q61124 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln3Q61124 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln3Q61124 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln3Q61124 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln3Q61124 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cln3Q61124 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.79■□□□□ 0.44
Cln3Q61124 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cln3Q61124 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cln3Q61124 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cln3Q61124 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cln3Q61124 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cln3Q61124 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Cln3Q61124 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln3Q61124 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.78■□□□□ 0.44
Cln3Q61124 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln3Q61124 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cln3Q61124 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln3Q61124 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln3Q61124 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln3Q61124 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.78■□□□□ 0.44
Cln3Q61124 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm8825-201ENSMUST00000182565 998 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm4518-201ENSMUST00000182638 718 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cln3Q61124 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln3Q61124 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cln3Q61124 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.78■□□□□ 0.44
Cln3Q61124 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln3Q61124 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cln3Q61124 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cln3Q61124 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.77■□□□□ 0.44
Cln3Q61124 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cln3Q61124 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cln3Q61124 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cln3Q61124 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cln3Q61124 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cln3Q61124 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cln3Q61124 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cln3Q61124 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cln3Q61124 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cln3Q61124 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cln3Q61124 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.77■□□□□ 0.44
Cln3Q61124 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cln3Q61124 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.77■□□□□ 0.44
Cln3Q61124 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Cln3Q61124 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cln3Q61124 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cln3Q61124 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cln3Q61124 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cln3Q61124 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cln3Q61124 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cln3Q61124 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms