Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.53■□□□□ 0.08
Nr1h4Q60641 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.53■□□□□ 0.08
Nr1h4Q60641 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1h4Q60641 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Nr1h4Q60641 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nr1h4Q60641 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nr1h4Q60641 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nr1h4Q60641 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nr1h4Q60641 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nr1h4Q60641 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nr1h4Q60641 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nr1h4Q60641 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.52■□□□□ 0.08
Nr1h4Q60641 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.52■□□□□ 0.08
Nr1h4Q60641 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nr1h4Q60641 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nr1h4Q60641 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Nr1h4Q60641 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nr1h4Q60641 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Nr1h4Q60641 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nr1h4Q60641 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Nr1h4Q60641 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nr1h4Q60641 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nr1h4Q60641 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nr1h4Q60641 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.51■□□□□ 0.07
Nr1h4Q60641 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Gm7791-201ENSMUST00000219066 539 ntBASIC15.51■□□□□ 0.07
Nr1h4Q60641 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.51■□□□□ 0.07
Nr1h4Q60641 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nr1h4Q60641 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.5■□□□□ 0.07
Nr1h4Q60641 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Timm23-208ENSMUST00000226683 750 ntBASIC15.5■□□□□ 0.07
Nr1h4Q60641 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nr1h4Q60641 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms