Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ccdc88aQ5SNZ0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc88aQ5SNZ0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc88aQ5SNZ0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc88aQ5SNZ0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Gm27321-201ENSMUST00000185021 205 ntBASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc88aQ5SNZ0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc88aQ5SNZ0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Gm13312-201ENSMUST00000119631 718 ntBASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc88aQ5SNZ0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Ccdc88aQ5SNZ0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc88aQ5SNZ0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Ccdc88aQ5SNZ0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc88aQ5SNZ0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms