Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav2Q5R1I9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav2Q5R1I9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13□□□□□ -0.33
Trav2Q5R1I9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav2Q5R1I9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13□□□□□ -0.33
Trav2Q5R1I9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav2Q5R1I9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13□□□□□ -0.33
Trav2Q5R1I9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13□□□□□ -0.33
Trav2Q5R1I9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav2Q5R1I9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13□□□□□ -0.33
Trav2Q5R1I9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13□□□□□ -0.33
Trav2Q5R1I9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trav2Q5R1I9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav2Q5R1I9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav2Q5R1I9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13□□□□□ -0.33
Trav2Q5R1I9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav2Q5R1I9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Gm24589-201ENSMUST00000116692 94 ntBASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Gm15372-201ENSMUST00000120729 834 ntBASIC12.99□□□□□ -0.33
Trav2Q5R1I9 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav2Q5R1I9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav2Q5R1I9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav2Q5R1I9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms