Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8d-1Q5R1H8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Mir2861-201ENSMUST00000175539 82 ntBASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Gm10698-201ENSMUST00000182663 604 ntBASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.38□□□□□ -0.27
Trav8d-1Q5R1H8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8d-1Q5R1H8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Gm42545-201ENSMUST00000202755 922 ntBASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8d-1Q5R1H8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms