Protein–RNA interactions for Protein: Q571G4

Lin54, Protein lin-54 homolog, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin54Q571G4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lin54Q571G4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Lin54Q571G4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lin54Q571G4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lin54Q571G4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lin54Q571G4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lin54Q571G4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lin54Q571G4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lin54Q571G4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lin54Q571G4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lin54Q571G4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lin54Q571G4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lin54Q571G4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lin54Q571G4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Lin54Q571G4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Lin54Q571G4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.16□□□□□ -0.14
Lin54Q571G4 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.16□□□□□ -0.14
Lin54Q571G4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.16□□□□□ -0.14
Lin54Q571G4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lin54Q571G4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.16□□□□□ -0.14
Lin54Q571G4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Lin54Q571G4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.16□□□□□ -0.14
Lin54Q571G4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lin54Q571G4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.15□□□□□ -0.14
Lin54Q571G4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.15□□□□□ -0.14
Lin54Q571G4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.15□□□□□ -0.14
Lin54Q571G4 Gm42545-201ENSMUST00000202755 922 ntBASIC14.15□□□□□ -0.14
Lin54Q571G4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.15□□□□□ -0.14
Lin54Q571G4 Gm4974-201ENSMUST00000209974 875 ntBASIC14.15□□□□□ -0.14
Lin54Q571G4 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.15□□□□□ -0.14
Lin54Q571G4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.15□□□□□ -0.14
Lin54Q571G4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lin54Q571G4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.15□□□□□ -0.14
Lin54Q571G4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Lin54Q571G4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lin54Q571G4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.14□□□□□ -0.15
Lin54Q571G4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.14□□□□□ -0.15
Lin54Q571G4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lin54Q571G4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.14□□□□□ -0.15
Lin54Q571G4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.14□□□□□ -0.15
Lin54Q571G4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lin54Q571G4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lin54Q571G4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms