Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rc3h1Q4VGL6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Rps4l-201ENSMUST00000071745 943 ntBASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.77■□□□□ 0.6
Rc3h1Q4VGL6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Gm6376-201ENSMUST00000209407 580 ntBASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.76■□□□□ 0.59
Rc3h1Q4VGL6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rc3h1Q4VGL6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Gm13216-201ENSMUST00000117145 591 ntBASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Gm7862-201ENSMUST00000121461 292 ntBASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rc3h1Q4VGL6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rc3h1Q4VGL6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms