Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Herc2Q4U2R1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Herc2Q4U2R1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Herc2Q4U2R1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Herc2Q4U2R1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Herc2Q4U2R1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Herc2Q4U2R1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Herc2Q4U2R1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Herc2Q4U2R1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Herc2Q4U2R1 Gm15358-201ENSMUST00000119249 520 ntBASIC9.65□□□□□ -0.87
Herc2Q4U2R1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Herc2Q4U2R1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC9.65□□□□□ -0.87
Herc2Q4U2R1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Herc2Q4U2R1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC9.65□□□□□ -0.87
Herc2Q4U2R1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Gm18489-201ENSMUST00000172565 551 ntBASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Gm45668-201ENSMUST00000211271 493 ntBASIC9.64□□□□□ -0.87
Herc2Q4U2R1 AC238811.3-201ENSMUST00000225422 709 ntBASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Herc2Q4U2R1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc2Q4U2R1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Gm6218-201ENSMUST00000219812 628 ntBASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc2Q4U2R1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms