Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ckap2Q3V1H1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ckap2Q3V1H1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.7■□□□□ 0.58
Ckap2Q3V1H1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ckap2Q3V1H1 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.7■□□□□ 0.58
Ckap2Q3V1H1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ckap2Q3V1H1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ckap2Q3V1H1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Gm7284-201ENSMUST00000131667 944 ntBASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.69■□□□□ 0.58
Ckap2Q3V1H1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Gm27357-201ENSMUST00000183754 135 ntBASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ckap2Q3V1H1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Ckap2Q3V1H1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Mir6404-201ENSMUST00000183699 94 ntBASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ckap2Q3V1H1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Mir3081-201ENSMUST00000175305 84 ntBASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ckap2Q3V1H1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms