Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC20.76■□□□□ 0.91
Ccdc27Q3V036 Mir5122-201ENSMUST00000175004 89 ntBASIC20.76■□□□□ 0.91
Ccdc27Q3V036 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc27Q3V036 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc27Q3V036 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc27Q3V036 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc27Q3V036 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc27Q3V036 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc27Q3V036 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.76■□□□□ 0.91
Ccdc27Q3V036 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc27Q3V036 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc27Q3V036 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc27Q3V036 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Gm18958-201ENSMUST00000174258 762 ntBASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc27Q3V036 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc27Q3V036 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms