Protein–RNA interactions for Protein: Q3UBX0

Tmem109, Transmembrane protein 109, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem109Q3UBX0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Tmem109Q3UBX0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem109Q3UBX0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Gm13559-201ENSMUST00000120476 863 ntBASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Gm26039-201ENSMUST00000158152 144 ntBASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem109Q3UBX0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 Gm27011-201ENSMUST00000182352 972 ntBASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.21■□□□□ 0.51
Tmem109Q3UBX0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem109Q3UBX0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Gm37055-201ENSMUST00000191866 133 ntBASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem109Q3UBX0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms