Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lins1Q3U1D0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lins1Q3U1D0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lins1Q3U1D0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Lins1Q3U1D0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lins1Q3U1D0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lins1Q3U1D0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Lins1Q3U1D0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lins1Q3U1D0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Lins1Q3U1D0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lins1Q3U1D0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Gm27525-201ENSMUST00000184465 107 ntBASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lins1Q3U1D0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lins1Q3U1D0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lins1Q3U1D0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.29■□□□□ 0.68
Lins1Q3U1D0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lins1Q3U1D0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lins1Q3U1D0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lins1Q3U1D0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lins1Q3U1D0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lins1Q3U1D0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.29■□□□□ 0.68
Lins1Q3U1D0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.29■□□□□ 0.68
Lins1Q3U1D0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lins1Q3U1D0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Lins1Q3U1D0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms