Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ctdnep1Q3TP92 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ctdnep1Q3TP92 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.83■□□□□ 0.61
Ctdnep1Q3TP92 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ctdnep1Q3TP92 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Ctdnep1Q3TP92 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ctdnep1Q3TP92 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ctdnep1Q3TP92 Mir7071-201ENSMUST00000184847 69 ntBASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.83■□□□□ 0.6
Ctdnep1Q3TP92 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Gm9013-201ENSMUST00000132939 882 ntBASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Gm5587-201ENSMUST00000206270 674 ntBASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ctdnep1Q3TP92 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ctdnep1Q3TP92 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.8■□□□□ 0.6
Ctdnep1Q3TP92 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Gm6659-201ENSMUST00000174752 547 ntBASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ctdnep1Q3TP92 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms