Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Gm8520-201ENSMUST00000186517 868 ntBASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nhej1Q3KNJ2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Gm44450-201ENSMUST00000199528 114 ntBASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nhej1Q3KNJ2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nhej1Q3KNJ2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.35■□□□□ 0.37
Nhej1Q3KNJ2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms