Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Gm37374-201ENSMUST00000194954 1829 ntBASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Fcho2-208ENSMUST00000224992 2964 ntBASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Gm8062-201ENSMUST00000139696 444 ntBASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Gm13226-201ENSMUST00000117838 404 ntBASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Gm15806-201ENSMUST00000120696 955 ntBASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Gm7172-201ENSMUST00000218047 1152 ntBASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Olfr582-201ENSMUST00000098212 960 ntBASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Notumos-201ENSMUST00000151998 2659 ntBASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ush2AQ2QI47 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Gm43272-201ENSMUST00000200599 1584 ntBASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Gm6415-201ENSMUST00000118488 348 ntBASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Ush2AQ2QI47 CT025555.1-201ENSMUST00000225901 1217 ntBASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Slc35b2-202ENSMUST00000223987 1766 ntBASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Gm10616-201ENSMUST00000205285 2127 ntBASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ush2AQ2QI47 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Gm9200-201ENSMUST00000118513 1354 ntBASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Gm18056-201ENSMUST00000207670 568 ntBASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Gm18061-201ENSMUST00000208350 562 ntBASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Gm18063-201ENSMUST00000208529 568 ntBASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Gm18052-201ENSMUST00000208750 559 ntBASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Gm18766-201ENSMUST00000189811 808 ntBASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Gm18934-201ENSMUST00000216671 1044 ntBASIC8.64□□□□□ -1.03
Ush2AQ2QI47 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ush2AQ2QI47 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms