Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Gm715-201ENSMUST00000117865 831 ntBASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ptchd3Q0EEE2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ptchd3Q0EEE2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ptchd3Q0EEE2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ptchd3Q0EEE2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ptchd3Q0EEE2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ptchd3Q0EEE2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Ptchd3Q0EEE2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ptchd3Q0EEE2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ptchd3Q0EEE2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms