Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col1a2Q01149 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.3■□□□□ 0.84
Col1a2Q01149 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.29■□□□□ 0.84
Col1a2Q01149 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.29■□□□□ 0.84
Col1a2Q01149 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col1a2Q01149 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col1a2Q01149 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col1a2Q01149 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col1a2Q01149 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Col1a2Q01149 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col1a2Q01149 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col1a2Q01149 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.29■□□□□ 0.84
Col1a2Q01149 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col1a2Q01149 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.29■□□□□ 0.84
Col1a2Q01149 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.29■□□□□ 0.84
Col1a2Q01149 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col1a2Q01149 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col1a2Q01149 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Col1a2Q01149 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col1a2Q01149 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.29■□□□□ 0.84
Col1a2Q01149 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.28■□□□□ 0.84
Col1a2Q01149 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm8825-201ENSMUST00000182565 998 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm4518-201ENSMUST00000182638 718 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.28■□□□□ 0.84
Col1a2Q01149 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.28■□□□□ 0.84
Col1a2Q01149 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.28■□□□□ 0.84
Col1a2Q01149 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col1a2Q01149 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col1a2Q01149 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Col1a2Q01149 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.27■□□□□ 0.84
Col1a2Q01149 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col1a2Q01149 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col1a2Q01149 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Col1a2Q01149 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col1a2Q01149 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col1a2Q01149 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Col1a2Q01149 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col1a2Q01149 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Col1a2Q01149 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col1a2Q01149 Gm7222-201ENSMUST00000117512 906 ntBASIC20.27■□□□□ 0.84
Col1a2Q01149 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.27■□□□□ 0.84
Col1a2Q01149 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.27■□□□□ 0.84
Col1a2Q01149 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.27■□□□□ 0.84
Col1a2Q01149 Gm5364-201ENSMUST00000216789 889 ntBASIC20.27■□□□□ 0.84
Col1a2Q01149 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Col1a2Q01149 Gm15590-201ENSMUST00000078419 552 ntBASIC20.27■□□□□ 0.84
Col1a2Q01149 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Col1a2Q01149 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col1a2Q01149 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Col1a2Q01149 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col1a2Q01149 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col1a2Q01149 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col1a2Q01149 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Col1a2Q01149 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col1a2Q01149 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col1a2Q01149 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Col1a2Q01149 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col1a2Q01149 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col1a2Q01149 Gm13036-201ENSMUST00000117799 748 ntBASIC20.26■□□□□ 0.83
Col1a2Q01149 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col1a2Q01149 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Col1a2Q01149 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Col1a2Q01149 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col1a2Q01149 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col1a2Q01149 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Col1a2Q01149 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Col1a2Q01149 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col1a2Q01149 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col1a2Q01149 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col1a2Q01149 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col1a2Q01149 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms