Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.33■□□□□ 0.84
Smarcc1P97496 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Smarcc1P97496 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarcc1P97496 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc1P97496 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc1P97496 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smarcc1P97496 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc1P97496 Gm27646-201ENSMUST00000183989 110 ntBASIC20.32■□□□□ 0.84
Smarcc1P97496 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc1P97496 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc1P97496 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc1P97496 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc1P97496 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc1P97496 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc1P97496 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc1P97496 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.32■□□□□ 0.84
Smarcc1P97496 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarcc1P97496 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Smarcc1P97496 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc1P97496 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc1P97496 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc1P97496 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc1P97496 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc1P97496 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc1P97496 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc1P97496 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc1P97496 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Smarcc1P97496 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Smarcc1P97496 Chchd1-203ENSMUST00000224633 557 ntBASIC20.31■□□□□ 0.84
Smarcc1P97496 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc1P97496 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
Smarcc1P97496 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc1P97496 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc1P97496 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Smarcc1P97496 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.31■□□□□ 0.84
Smarcc1P97496 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarcc1P97496 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc1P97496 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Smarcc1P97496 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.3■□□□□ 0.84
Smarcc1P97496 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc1P97496 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc1P97496 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc1P97496 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.3■□□□□ 0.84
Smarcc1P97496 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.3■□□□□ 0.84
Smarcc1P97496 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc1P97496 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc1P97496 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc1P97496 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc1P97496 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc1P97496 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarcc1P97496 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.29■□□□□ 0.84
Smarcc1P97496 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc1P97496 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc1P97496 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.29■□□□□ 0.84
Smarcc1P97496 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc1P97496 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc1P97496 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc1P97496 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc1P97496 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Smarcc1P97496 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Smarcc1P97496 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc1P97496 Gm11764-201ENSMUST00000120221 623 ntBASIC20.29■□□□□ 0.84
Smarcc1P97496 Gm5682-201ENSMUST00000173402 505 ntBASIC20.29■□□□□ 0.84
Smarcc1P97496 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.29■□□□□ 0.84
Smarcc1P97496 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Smarcc1P97496 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.29■□□□□ 0.84
Smarcc1P97496 Gm18622-201ENSMUST00000219361 595 ntBASIC20.29■□□□□ 0.84
Smarcc1P97496 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.29■□□□□ 0.84
Smarcc1P97496 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc1P97496 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Smarcc1P97496 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.29■□□□□ 0.84
Smarcc1P97496 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Smarcc1P97496 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smarcc1P97496 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.29■□□□□ 0.84
Smarcc1P97496 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.28■□□□□ 0.84
Smarcc1P97496 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.28■□□□□ 0.84
Smarcc1P97496 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC20.28■□□□□ 0.84
Smarcc1P97496 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Smarcc1P97496 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.28■□□□□ 0.84
Smarcc1P97496 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smarcc1P97496 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc1P97496 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc1P97496 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc1P97496 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Smarcc1P97496 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc1P97496 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smarcc1P97496 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms