Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Npas1P97459 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Npas1P97459 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npas1P97459 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Npas1P97459 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npas1P97459 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npas1P97459 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npas1P97459 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npas1P97459 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npas1P97459 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Npas1P97459 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npas1P97459 Gm15375-201ENSMUST00000119510 849 ntBASIC13.71□□□□□ -0.21
Npas1P97459 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npas1P97459 Mir5133-201ENSMUST00000174955 77 ntBASIC13.71□□□□□ -0.21
Npas1P97459 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.71□□□□□ -0.21
Npas1P97459 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.71□□□□□ -0.21
Npas1P97459 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Npas1P97459 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Npas1P97459 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.71□□□□□ -0.21
Npas1P97459 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Npas1P97459 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Npas1P97459 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Npas1P97459 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Npas1P97459 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Npas1P97459 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Npas1P97459 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Npas1P97459 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Npas1P97459 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Npas1P97459 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Npas1P97459 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Npas1P97459 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Npas1P97459 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Npas1P97459 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Npas1P97459 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Npas1P97459 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Npas1P97459 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Npas1P97459 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.7□□□□□ -0.22
Npas1P97459 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Npas1P97459 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.7□□□□□ -0.22
Npas1P97459 Gm10138-203ENSMUST00000206952 366 ntBASIC13.7□□□□□ -0.22
Npas1P97459 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.7□□□□□ -0.22
Npas1P97459 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.7□□□□□ -0.22
Npas1P97459 Gm4968-201ENSMUST00000071458 858 ntBASIC13.7□□□□□ -0.22
Npas1P97459 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Npas1P97459 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.7□□□□□ -0.22
Npas1P97459 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Npas1P97459 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Npas1P97459 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Npas1P97459 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Npas1P97459 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.69□□□□□ -0.22
Npas1P97459 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Npas1P97459 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Npas1P97459 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.69□□□□□ -0.22
Npas1P97459 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Npas1P97459 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.69□□□□□ -0.22
Npas1P97459 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.69□□□□□ -0.22
Npas1P97459 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Npas1P97459 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.69□□□□□ -0.22
Npas1P97459 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Npas1P97459 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Npas1P97459 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms