Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1aP97445 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cacna1aP97445 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Cacna1aP97445 Gm20949-201ENSMUST00000206478 952 ntBASIC14.99□□□□□ -0.01
Cacna1aP97445 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1aP97445 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1aP97445 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1aP97445 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1aP97445 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.99□□□□□ -0.01
Cacna1aP97445 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1aP97445 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cacna1aP97445 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1aP97445 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1aP97445 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.99□□□□□ -0.01
Cacna1aP97445 Gm25406-201ENSMUST00000157599 105 ntBASIC14.99□□□□□ -0.01
Cacna1aP97445 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.99□□□□□ -0.01
Cacna1aP97445 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1aP97445 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Cacna1aP97445 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1aP97445 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1aP97445 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Cacna1aP97445 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.98□□□□□ -0.01
Cacna1aP97445 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Cacna1aP97445 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.98□□□□□ -0.01
Cacna1aP97445 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.98□□□□□ -0.01
Cacna1aP97445 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cacna1aP97445 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Gm11780-201ENSMUST00000136880 516 ntBASIC14.98□□□□□ -0.01
Cacna1aP97445 AA543401-201ENSMUST00000164248 1269 ntBASIC14.98□□□□□ -0.01
Cacna1aP97445 Mir3113-201ENSMUST00000175478 76 ntBASIC14.98□□□□□ -0.01
Cacna1aP97445 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.98□□□□□ -0.01
Cacna1aP97445 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cacna1aP97445 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cacna1aP97445 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1aP97445 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cacna1aP97445 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.97□□□□□ -0.01
Cacna1aP97445 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.97□□□□□ -0.01
Cacna1aP97445 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.97□□□□□ -0.01
Cacna1aP97445 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Cacna1aP97445 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cacna1aP97445 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.97□□□□□ -0.01
Cacna1aP97445 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Cacna1aP97445 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.97□□□□□ -0.01
Cacna1aP97445 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.97□□□□□ -0.01
Cacna1aP97445 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Cacna1aP97445 Gm5682-201ENSMUST00000173402 505 ntBASIC14.97□□□□□ -0.01
Cacna1aP97445 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Gm9172-201ENSMUST00000212092 954 ntBASIC14.97□□□□□ -0.01
Cacna1aP97445 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Gm15590-201ENSMUST00000078419 552 ntBASIC14.97□□□□□ -0.01
Cacna1aP97445 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cacna1aP97445 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1aP97445 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cacna1aP97445 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1aP97445 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1aP97445 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1aP97445 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.96□□□□□ -0.01
Cacna1aP97445 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cacna1aP97445 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1aP97445 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1aP97445 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1aP97445 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.96□□□□□ -0.01
Cacna1aP97445 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.96□□□□□ -0.01
Cacna1aP97445 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cacna1aP97445 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1aP97445 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1aP97445 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cacna1aP97445 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1aP97445 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cacna1aP97445 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms