Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm14928-201ENSMUST00000120198 477 ntBASIC11.1□□□□□ -0.63
PrkdcP97313 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.1□□□□□ -0.63
PrkdcP97313 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.1□□□□□ -0.63
PrkdcP97313 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
PrkdcP97313 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Gm37194-201ENSMUST00000193092 3031 ntBASIC11.1□□□□□ -0.63
PrkdcP97313 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
PrkdcP97313 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
PrkdcP97313 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.1□□□□□ -0.63
PrkdcP97313 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
PrkdcP97313 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Gm18062-201ENSMUST00000208020 547 ntBASIC11.1□□□□□ -0.63
PrkdcP97313 Gm18055-201ENSMUST00000208254 547 ntBASIC11.1□□□□□ -0.63
PrkdcP97313 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.1□□□□□ -0.63
PrkdcP97313 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
PrkdcP97313 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PrkdcP97313 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PrkdcP97313 Gm7730-201ENSMUST00000212486 454 ntBASIC11.09□□□□□ -0.63
PrkdcP97313 Thap2-203ENSMUST00000218989 527 ntBASIC11.09□□□□□ -0.63
PrkdcP97313 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PrkdcP97313 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PrkdcP97313 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PrkdcP97313 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
PrkdcP97313 Mir7684-201ENSMUST00000183858 60 ntBASIC11.09□□□□□ -0.63
PrkdcP97313 Gm44719-201ENSMUST00000206404 149 ntBASIC11.09□□□□□ -0.63
PrkdcP97313 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.09□□□□□ -0.63
PrkdcP97313 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
PrkdcP97313 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
PrkdcP97313 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PrkdcP97313 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PrkdcP97313 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PrkdcP97313 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.09□□□□□ -0.63
PrkdcP97313 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
PrkdcP97313 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.09□□□□□ -0.63
PrkdcP97313 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PrkdcP97313 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PrkdcP97313 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PrkdcP97313 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PrkdcP97313 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.09□□□□□ -0.63
PrkdcP97313 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
PrkdcP97313 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Gm12138-201ENSMUST00000122180 951 ntBASIC11.08□□□□□ -0.64
PrkdcP97313 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.08□□□□□ -0.64
PrkdcP97313 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.08□□□□□ -0.64
PrkdcP97313 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
PrkdcP97313 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Gm9899-201ENSMUST00000065519 555 ntBASIC11.08□□□□□ -0.64
PrkdcP97313 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
PrkdcP97313 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
PrkdcP97313 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.08□□□□□ -0.64
PrkdcP97313 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Gm15487-201ENSMUST00000122373 465 ntBASIC11.08□□□□□ -0.64
PrkdcP97313 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.08□□□□□ -0.64
PrkdcP97313 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.08□□□□□ -0.64
PrkdcP97313 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
PrkdcP97313 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.08□□□□□ -0.64
PrkdcP97313 Gm18489-201ENSMUST00000172565 551 ntBASIC11.08□□□□□ -0.64
PrkdcP97313 Gm5779-201ENSMUST00000218467 910 ntBASIC11.08□□□□□ -0.64
PrkdcP97313 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
PrkdcP97313 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PrkdcP97313 Gm9794-201ENSMUST00000202370 423 ntBASIC11.07□□□□□ -0.64
PrkdcP97313 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.07□□□□□ -0.64
PrkdcP97313 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
PrkdcP97313 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.07□□□□□ -0.64
PrkdcP97313 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.07□□□□□ -0.64
PrkdcP97313 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.07□□□□□ -0.64
PrkdcP97313 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
PrkdcP97313 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.07□□□□□ -0.64
PrkdcP97313 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PrkdcP97313 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms