Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Gm25016-201ENSMUST00000158399 131 ntBASIC17.73■□□□□ 0.43
Trim43cP86449 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Trim43cP86449 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43cP86449 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim43cP86449 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim43cP86449 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43cP86449 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43cP86449 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43cP86449 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43cP86449 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43cP86449 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43cP86449 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim43cP86449 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Trim43cP86449 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43cP86449 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43cP86449 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Trim43cP86449 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43cP86449 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43cP86449 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim43cP86449 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.71■□□□□ 0.42
Trim43cP86449 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim43cP86449 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43cP86449 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43cP86449 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim43cP86449 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43cP86449 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43cP86449 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43cP86449 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43cP86449 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim43cP86449 Olfr129-201ENSMUST00000122318 993 ntBASIC17.7■□□□□ 0.42
Trim43cP86449 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
Trim43cP86449 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43cP86449 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43cP86449 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.7■□□□□ 0.42
Trim43cP86449 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim43cP86449 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43cP86449 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.7■□□□□ 0.42
Trim43cP86449 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43cP86449 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43cP86449 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim43cP86449 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim43cP86449 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim43cP86449 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trim43cP86449 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.69■□□□□ 0.42
Trim43cP86449 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim43cP86449 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Trim43cP86449 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim43cP86449 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trim43cP86449 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim43cP86449 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim43cP86449 Gm45328-201ENSMUST00000210942 917 ntBASIC17.68■□□□□ 0.42
Trim43cP86449 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms