Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Gm27742-201ENSMUST00000184667 60 ntBASIC14.53□□□□□ -0.08
SgcbP82349 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SgcbP82349 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SgcbP82349 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.52□□□□□ -0.08
SgcbP82349 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SgcbP82349 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.52□□□□□ -0.08
SgcbP82349 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SgcbP82349 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SgcbP82349 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SgcbP82349 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
SgcbP82349 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.52□□□□□ -0.08
SgcbP82349 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SgcbP82349 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SgcbP82349 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SgcbP82349 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SgcbP82349 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SgcbP82349 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SgcbP82349 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SgcbP82349 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SgcbP82349 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SgcbP82349 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SgcbP82349 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.51□□□□□ -0.09
SgcbP82349 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SgcbP82349 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.51□□□□□ -0.09
SgcbP82349 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SgcbP82349 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SgcbP82349 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SgcbP82349 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SgcbP82349 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
SgcbP82349 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SgcbP82349 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.5□□□□□ -0.09
SgcbP82349 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.5□□□□□ -0.09
SgcbP82349 Gm17807-201ENSMUST00000186869 298 ntBASIC14.5□□□□□ -0.09
SgcbP82349 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.5□□□□□ -0.09
SgcbP82349 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SgcbP82349 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.5□□□□□ -0.09
SgcbP82349 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SgcbP82349 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SgcbP82349 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SgcbP82349 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SgcbP82349 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.49□□□□□ -0.09
SgcbP82349 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms