Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CiitaP79621 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CiitaP79621 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CiitaP79621 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CiitaP79621 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CiitaP79621 Mir6404-201ENSMUST00000183699 94 ntBASIC17.61■□□□□ 0.41
CiitaP79621 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.61■□□□□ 0.41
CiitaP79621 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.61■□□□□ 0.41
CiitaP79621 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CiitaP79621 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CiitaP79621 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CiitaP79621 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CiitaP79621 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.61■□□□□ 0.41
CiitaP79621 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CiitaP79621 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CiitaP79621 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CiitaP79621 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CiitaP79621 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.6■□□□□ 0.41
CiitaP79621 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CiitaP79621 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CiitaP79621 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CiitaP79621 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CiitaP79621 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CiitaP79621 Gm13884-201ENSMUST00000118103 829 ntBASIC17.6■□□□□ 0.41
CiitaP79621 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CiitaP79621 Gm28659-201ENSMUST00000188013 759 ntBASIC17.6■□□□□ 0.41
CiitaP79621 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.6■□□□□ 0.41
CiitaP79621 Gm5864-201ENSMUST00000202263 970 ntBASIC17.6■□□□□ 0.41
CiitaP79621 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CiitaP79621 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CiitaP79621 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CiitaP79621 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CiitaP79621 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CiitaP79621 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CiitaP79621 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
CiitaP79621 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CiitaP79621 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CiitaP79621 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CiitaP79621 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CiitaP79621 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CiitaP79621 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CiitaP79621 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CiitaP79621 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CiitaP79621 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CiitaP79621 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CiitaP79621 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CiitaP79621 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.59■□□□□ 0.41
CiitaP79621 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.59■□□□□ 0.41
CiitaP79621 Gm25745-201ENSMUST00000174945 133 ntBASIC17.59■□□□□ 0.41
CiitaP79621 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.59■□□□□ 0.41
CiitaP79621 Mir8098-201ENSMUST00000184011 137 ntBASIC17.59■□□□□ 0.41
CiitaP79621 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CiitaP79621 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CiitaP79621 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CiitaP79621 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CiitaP79621 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CiitaP79621 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
CiitaP79621 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CiitaP79621 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CiitaP79621 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CiitaP79621 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
CiitaP79621 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.58■□□□□ 0.4
CiitaP79621 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.58■□□□□ 0.4
CiitaP79621 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CiitaP79621 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CiitaP79621 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CiitaP79621 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.57■□□□□ 0.4
CiitaP79621 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CiitaP79621 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.57■□□□□ 0.4
CiitaP79621 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CiitaP79621 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.57■□□□□ 0.4
CiitaP79621 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CiitaP79621 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CiitaP79621 Gm44357-201ENSMUST00000195897 142 ntBASIC17.57■□□□□ 0.4
CiitaP79621 Gm19658-201ENSMUST00000196231 138 ntBASIC17.57■□□□□ 0.4
CiitaP79621 Gm44367-201ENSMUST00000196836 138 ntBASIC17.57■□□□□ 0.4
CiitaP79621 Gm44350-201ENSMUST00000197197 138 ntBASIC17.57■□□□□ 0.4
CiitaP79621 Gm44390-201ENSMUST00000197533 144 ntBASIC17.57■□□□□ 0.4
CiitaP79621 Gm44313-201ENSMUST00000198018 138 ntBASIC17.57■□□□□ 0.4
CiitaP79621 Gm44486-201ENSMUST00000198508 138 ntBASIC17.57■□□□□ 0.4
CiitaP79621 Gm44314-201ENSMUST00000199263 138 ntBASIC17.57■□□□□ 0.4
CiitaP79621 Gm44394-201ENSMUST00000199558 138 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms