Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Shox2P70390 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.18■□□□□ 0.18
Shox2P70390 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shox2P70390 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shox2P70390 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shox2P70390 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shox2P70390 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shox2P70390 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shox2P70390 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.17■□□□□ 0.18
Shox2P70390 Gm10033-202ENSMUST00000211874 928 ntBASIC16.17■□□□□ 0.18
Shox2P70390 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.17■□□□□ 0.18
Shox2P70390 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shox2P70390 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shox2P70390 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shox2P70390 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shox2P70390 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shox2P70390 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shox2P70390 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shox2P70390 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shox2P70390 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.16■□□□□ 0.18
Shox2P70390 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shox2P70390 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shox2P70390 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shox2P70390 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shox2P70390 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shox2P70390 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.16■□□□□ 0.18
Shox2P70390 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shox2P70390 Gm7290-201ENSMUST00000104990 617 ntBASIC16.16■□□□□ 0.18
Shox2P70390 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shox2P70390 Gm12918-201ENSMUST00000120234 636 ntBASIC16.16■□□□□ 0.18
Shox2P70390 Gm15710-201ENSMUST00000121821 636 ntBASIC16.16■□□□□ 0.18
Shox2P70390 Gm37025-201ENSMUST00000195159 829 ntBASIC16.16■□□□□ 0.18
Shox2P70390 Gm5075-201ENSMUST00000196916 622 ntBASIC16.16■□□□□ 0.18
Shox2P70390 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.16■□□□□ 0.18
Shox2P70390 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.16■□□□□ 0.18
Shox2P70390 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shox2P70390 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shox2P70390 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shox2P70390 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shox2P70390 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shox2P70390 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Shox2P70390 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shox2P70390 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shox2P70390 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shox2P70390 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.15■□□□□ 0.18
Shox2P70390 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shox2P70390 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Shox2P70390 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shox2P70390 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Shox2P70390 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Shox2P70390 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shox2P70390 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shox2P70390 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shox2P70390 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shox2P70390 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shox2P70390 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shox2P70390 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.14■□□□□ 0.18
Shox2P70390 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.14■□□□□ 0.17
Shox2P70390 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
Shox2P70390 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.14■□□□□ 0.17
Shox2P70390 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Shox2P70390 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Shox2P70390 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Shox2P70390 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Shox2P70390 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shox2P70390 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Shox2P70390 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Shox2P70390 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shox2P70390 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shox2P70390 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Shox2P70390 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shox2P70390 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shox2P70390 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shox2P70390 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shox2P70390 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shox2P70390 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shox2P70390 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Shox2P70390 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shox2P70390 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shox2P70390 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shox2P70390 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms