Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.67□□□□□ -0.54
Rpl39P62892 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rpl39P62892 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.67□□□□□ -0.54
Rpl39P62892 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.67□□□□□ -0.54
Rpl39P62892 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.67□□□□□ -0.54
Rpl39P62892 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rpl39P62892 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Rpl39P62892 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpl39P62892 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Rpl39P62892 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Rpl39P62892 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rpl39P62892 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpl39P62892 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpl39P62892 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpl39P62892 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Rpl39P62892 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpl39P62892 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpl39P62892 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpl39P62892 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpl39P62892 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpl39P62892 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rpl39P62892 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.66□□□□□ -0.54
Rpl39P62892 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.66□□□□□ -0.54
Rpl39P62892 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Rpl39P62892 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
Rpl39P62892 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.66□□□□□ -0.54
Rpl39P62892 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rpl39P62892 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Rpl39P62892 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Rpl39P62892 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Gm12382-201ENSMUST00000122005 922 ntBASIC11.66□□□□□ -0.54
Rpl39P62892 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.66□□□□□ -0.54
Rpl39P62892 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rpl39P62892 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.66□□□□□ -0.54
Rpl39P62892 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rpl39P62892 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rpl39P62892 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Rpl39P62892 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.65□□□□□ -0.54
Rpl39P62892 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Rpl39P62892 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Gm11249-201ENSMUST00000117071 859 ntBASIC11.65□□□□□ -0.54
Rpl39P62892 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.65□□□□□ -0.54
Rpl39P62892 Gm17661-201ENSMUST00000170317 270 ntBASIC11.65□□□□□ -0.54
Rpl39P62892 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Gm27000-201ENSMUST00000182943 842 ntBASIC11.65□□□□□ -0.54
Rpl39P62892 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.65□□□□□ -0.54
Rpl39P62892 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.65□□□□□ -0.54
Rpl39P62892 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rpl39P62892 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.65□□□□□ -0.54
Rpl39P62892 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.65□□□□□ -0.54
Rpl39P62892 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rpl39P62892 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.65□□□□□ -0.55
Rpl39P62892 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rpl39P62892 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rpl39P62892 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.65□□□□□ -0.55
Rpl39P62892 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rpl39P62892 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rpl39P62892 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.55
Rpl39P62892 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Rpl39P62892 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Rpl39P62892 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Rpl39P62892 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Rpl39P62892 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.64□□□□□ -0.55
Rpl39P62892 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.64□□□□□ -0.55
Rpl39P62892 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rpl39P62892 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms