Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.65□□□□□ -0.22
Lsm5P62322 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.65□□□□□ -0.22
Lsm5P62322 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Lsm5P62322 Gm18671-201ENSMUST00000214826 683 ntBASIC13.65□□□□□ -0.22
Lsm5P62322 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Lsm5P62322 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Lsm5P62322 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Lsm5P62322 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Lsm5P62322 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lsm5P62322 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.64□□□□□ -0.23
Lsm5P62322 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Gm6211-202ENSMUST00000167849 925 ntBASIC13.64□□□□□ -0.23
Lsm5P62322 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.64□□□□□ -0.23
Lsm5P62322 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.64□□□□□ -0.23
Lsm5P62322 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lsm5P62322 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lsm5P62322 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Lsm5P62322 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.64□□□□□ -0.23
Lsm5P62322 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.64□□□□□ -0.23
Lsm5P62322 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Lsm5P62322 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm5P62322 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lsm5P62322 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Lsm5P62322 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.63□□□□□ -0.23
Lsm5P62322 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.63□□□□□ -0.23
Lsm5P62322 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lsm5P62322 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lsm5P62322 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lsm5P62322 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm5P62322 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm5P62322 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm5P62322 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.62□□□□□ -0.23
Lsm5P62322 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm5P62322 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lsm5P62322 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm5P62322 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm5P62322 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.62□□□□□ -0.23
Lsm5P62322 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm5P62322 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm5P62322 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm5P62322 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm5P62322 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm5P62322 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm5P62322 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm5P62322 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm5P62322 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm5P62322 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lsm5P62322 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms