Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Lsm3P62311 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.95□□□□□ -0.02
Lsm3P62311 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm3P62311 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Lsm3P62311 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Lsm3P62311 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.94□□□□□ -0.02
Lsm3P62311 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Lsm3P62311 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm3P62311 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm3P62311 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.94□□□□□ -0.02
Lsm3P62311 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm3P62311 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm3P62311 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm3P62311 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.94□□□□□ -0.02
Lsm3P62311 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.94□□□□□ -0.02
Lsm3P62311 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.94□□□□□ -0.02
Lsm3P62311 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm3P62311 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm3P62311 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Lsm3P62311 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm3P62311 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Lsm3P62311 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Lsm3P62311 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm3P62311 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Lsm3P62311 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Lsm3P62311 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Lsm3P62311 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Lsm3P62311 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm3P62311 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm3P62311 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm3P62311 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.93□□□□□ -0.02
Lsm3P62311 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Lsm3P62311 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.93□□□□□ -0.02
Lsm3P62311 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Lsm3P62311 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Lsm3P62311 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm3P62311 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm3P62311 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm3P62311 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Lsm3P62311 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm3P62311 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Lsm3P62311 Gm12821-201ENSMUST00000120022 600 ntBASIC14.92□□□□□ -0.02
Lsm3P62311 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm3P62311 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.92□□□□□ -0.02
Lsm3P62311 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Lsm3P62311 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.92□□□□□ -0.02
Lsm3P62311 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm3P62311 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm3P62311 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.92□□□□□ -0.02
Lsm3P62311 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm3P62311 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm3P62311 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm3P62311 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm3P62311 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.91□□□□□ -0.02
Lsm3P62311 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm3P62311 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms