Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.48□□□□□ -0.09
Sf3b6P59708 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.48□□□□□ -0.09
Sf3b6P59708 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.48□□□□□ -0.09
Sf3b6P59708 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.48□□□□□ -0.09
Sf3b6P59708 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b6P59708 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sf3b6P59708 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b6P59708 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sf3b6P59708 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3b6P59708 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.48□□□□□ -0.09
Sf3b6P59708 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sf3b6P59708 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Sf3b6P59708 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.47□□□□□ -0.09
Sf3b6P59708 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.47□□□□□ -0.09
Sf3b6P59708 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.47□□□□□ -0.09
Sf3b6P59708 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.47□□□□□ -0.09
Sf3b6P59708 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sf3b6P59708 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.47□□□□□ -0.09
Sf3b6P59708 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Sf3b6P59708 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sf3b6P59708 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b6P59708 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b6P59708 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b6P59708 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b6P59708 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b6P59708 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b6P59708 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.46□□□□□ -0.09
Sf3b6P59708 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b6P59708 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.46□□□□□ -0.09
Sf3b6P59708 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b6P59708 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sf3b6P59708 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.46□□□□□ -0.09
Sf3b6P59708 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.46□□□□□ -0.09
Sf3b6P59708 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.46□□□□□ -0.09
Sf3b6P59708 Gm43183-201ENSMUST00000200632 547 ntBASIC14.46□□□□□ -0.09
Sf3b6P59708 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sf3b6P59708 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sf3b6P59708 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Sf3b6P59708 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Sf3b6P59708 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sf3b6P59708 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.45□□□□□ -0.1
Sf3b6P59708 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.45□□□□□ -0.1
Sf3b6P59708 Gm10698-201ENSMUST00000182663 604 ntBASIC14.45□□□□□ -0.1
Sf3b6P59708 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.45□□□□□ -0.1
Sf3b6P59708 Il3ra-202ENSMUST00000223589 738 ntBASIC14.45□□□□□ -0.1
Sf3b6P59708 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sf3b6P59708 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.45□□□□□ -0.1
Sf3b6P59708 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b6P59708 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.44□□□□□ -0.1
Sf3b6P59708 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.44□□□□□ -0.1
Sf3b6P59708 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.44□□□□□ -0.1
Sf3b6P59708 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.44□□□□□ -0.1
Sf3b6P59708 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.44□□□□□ -0.1
Sf3b6P59708 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b6P59708 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms