Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tpm1P58771 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tpm1P58771 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tpm1P58771 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tpm1P58771 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tpm1P58771 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tpm1P58771 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Tpm1P58771 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.22■□□□□ 0.51
Tpm1P58771 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpm1P58771 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tpm1P58771 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpm1P58771 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tpm1P58771 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tpm1P58771 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
Tpm1P58771 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpm1P58771 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.22■□□□□ 0.51
Tpm1P58771 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpm1P58771 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpm1P58771 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpm1P58771 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tpm1P58771 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpm1P58771 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpm1P58771 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tpm1P58771 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Tpm1P58771 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tpm1P58771 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tpm1P58771 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tpm1P58771 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tpm1P58771 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.21■□□□□ 0.51
Tpm1P58771 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tpm1P58771 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.21■□□□□ 0.51
Tpm1P58771 Gm43183-201ENSMUST00000200632 547 ntBASIC18.21■□□□□ 0.51
Tpm1P58771 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.21■□□□□ 0.51
Tpm1P58771 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Tpm1P58771 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Tpm1P58771 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpm1P58771 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpm1P58771 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpm1P58771 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpm1P58771 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpm1P58771 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpm1P58771 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpm1P58771 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.2■□□□□ 0.5
Tpm1P58771 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.2■□□□□ 0.5
Tpm1P58771 Gm27000-201ENSMUST00000182943 842 ntBASIC18.2■□□□□ 0.5
Tpm1P58771 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.2■□□□□ 0.5
Tpm1P58771 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpm1P58771 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpm1P58771 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpm1P58771 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tpm1P58771 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tpm1P58771 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tpm1P58771 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.19■□□□□ 0.5
Tpm1P58771 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tpm1P58771 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.19■□□□□ 0.5
Tpm1P58771 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.19■□□□□ 0.5
Tpm1P58771 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tpm1P58771 Gm9731-201ENSMUST00000209480 747 ntBASIC18.19■□□□□ 0.5
Tpm1P58771 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.19■□□□□ 0.5
Tpm1P58771 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.19■□□□□ 0.5
Tpm1P58771 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.19■□□□□ 0.5
Tpm1P58771 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tpm1P58771 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tpm1P58771 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpm1P58771 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpm1P58771 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpm1P58771 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpm1P58771 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpm1P58771 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpm1P58771 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tpm1P58771 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpm1P58771 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tpm1P58771 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tpm1P58771 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.18■□□□□ 0.5
Tpm1P58771 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.18■□□□□ 0.5
Tpm1P58771 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.18■□□□□ 0.5
Tpm1P58771 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.18■□□□□ 0.5
Tpm1P58771 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.18■□□□□ 0.5
Tpm1P58771 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.18■□□□□ 0.5
Tpm1P58771 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tpm1P58771 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tpm1P58771 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tpm1P58771 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tpm1P58771 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms