Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.4■□□□□ 0.54
Rrp1P56183 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.4■□□□□ 0.54
Rrp1P56183 Gm21814-202ENSMUST00000203277 873 ntBASIC18.4■□□□□ 0.54
Rrp1P56183 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.4■□□□□ 0.54
Rrp1P56183 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp1P56183 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rrp1P56183 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp1P56183 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Rrp1P56183 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp1P56183 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.4■□□□□ 0.54
Rrp1P56183 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rrp1P56183 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.4■□□□□ 0.54
Rrp1P56183 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.39■□□□□ 0.54
Rrp1P56183 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rrp1P56183 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rrp1P56183 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rrp1P56183 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rrp1P56183 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.39■□□□□ 0.54
Rrp1P56183 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rrp1P56183 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.39■□□□□ 0.53
Rrp1P56183 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.39■□□□□ 0.53
Rrp1P56183 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.39■□□□□ 0.53
Rrp1P56183 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.39■□□□□ 0.53
Rrp1P56183 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rrp1P56183 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Rrp1P56183 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rrp1P56183 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.38■□□□□ 0.53
Rrp1P56183 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.38■□□□□ 0.53
Rrp1P56183 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.38■□□□□ 0.53
Rrp1P56183 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.38■□□□□ 0.53
Rrp1P56183 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rrp1P56183 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.38■□□□□ 0.53
Rrp1P56183 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rrp1P56183 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rrp1P56183 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rrp1P56183 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Gm11539-201ENSMUST00000119837 557 ntBASIC18.37■□□□□ 0.53
Rrp1P56183 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Gm27463-201ENSMUST00000183569 57 ntBASIC18.37■□□□□ 0.53
Rrp1P56183 Mir6982-201ENSMUST00000184354 68 ntBASIC18.37■□□□□ 0.53
Rrp1P56183 Gm36967-201ENSMUST00000193814 266 ntBASIC18.37■□□□□ 0.53
Rrp1P56183 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.37■□□□□ 0.53
Rrp1P56183 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rrp1P56183 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rrp1P56183 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rrp1P56183 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rrp1P56183 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.37■□□□□ 0.53
Rrp1P56183 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rrp1P56183 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp1P56183 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rrp1P56183 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rrp1P56183 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rrp1P56183 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rrp1P56183 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.36■□□□□ 0.53
Rrp1P56183 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rrp1P56183 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.36■□□□□ 0.53
Rrp1P56183 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.36■□□□□ 0.53
Rrp1P56183 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rrp1P56183 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms