Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abcd3P55096 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Abcd3P55096 Gm18032-201ENSMUST00000222541 538 ntBASIC14.59□□□□□ -0.07
Abcd3P55096 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abcd3P55096 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Abcd3P55096 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Abcd3P55096 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.59□□□□□ -0.07
Abcd3P55096 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abcd3P55096 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.59□□□□□ -0.07
Abcd3P55096 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abcd3P55096 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Abcd3P55096 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abcd3P55096 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Abcd3P55096 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abcd3P55096 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abcd3P55096 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Abcd3P55096 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Abcd3P55096 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abcd3P55096 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abcd3P55096 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abcd3P55096 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abcd3P55096 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Abcd3P55096 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Abcd3P55096 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abcd3P55096 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abcd3P55096 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Abcd3P55096 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Abcd3P55096 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.58□□□□□ -0.08
Abcd3P55096 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.58□□□□□ -0.08
Abcd3P55096 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.58□□□□□ -0.08
Abcd3P55096 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Abcd3P55096 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.58□□□□□ -0.08
Abcd3P55096 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abcd3P55096 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Abcd3P55096 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.57□□□□□ -0.08
Abcd3P55096 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Abcd3P55096 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.57□□□□□ -0.08
Abcd3P55096 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Abcd3P55096 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abcd3P55096 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Abcd3P55096 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.56□□□□□ -0.08
Abcd3P55096 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.56□□□□□ -0.08
Abcd3P55096 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Abcd3P55096 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Abcd3P55096 Gm11355-201ENSMUST00000121120 306 ntBASIC14.56□□□□□ -0.08
Abcd3P55096 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.56□□□□□ -0.08
Abcd3P55096 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Abcd3P55096 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.56□□□□□ -0.08
Abcd3P55096 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Abcd3P55096 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms