Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox1P53783 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.61■□□□□ 0.25
Sox1P53783 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.61■□□□□ 0.25
Sox1P53783 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sox1P53783 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox1P53783 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox1P53783 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.61■□□□□ 0.25
Sox1P53783 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.61■□□□□ 0.25
Sox1P53783 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox1P53783 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox1P53783 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Sox1P53783 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sox1P53783 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox1P53783 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.6■□□□□ 0.25
Sox1P53783 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox1P53783 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.6■□□□□ 0.25
Sox1P53783 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox1P53783 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.6■□□□□ 0.25
Sox1P53783 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.6■□□□□ 0.25
Sox1P53783 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox1P53783 Gm45612-201ENSMUST00000211320 160 ntBASIC16.6■□□□□ 0.25
Sox1P53783 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox1P53783 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sox1P53783 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox1P53783 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox1P53783 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox1P53783 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sox1P53783 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox1P53783 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sox1P53783 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox1P53783 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.6■□□□□ 0.25
Sox1P53783 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sox1P53783 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Sox1P53783 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 Fst-202ENSMUST00000223640 2612 ntBASIC16.59■□□□□ 0.25
Sox1P53783 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Sox1P53783 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
Sox1P53783 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sox1P53783 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 Gm9172-201ENSMUST00000212092 954 ntBASIC16.59■□□□□ 0.25
Sox1P53783 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.59■□□□□ 0.25
Sox1P53783 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.59■□□□□ 0.25
Sox1P53783 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.59■□□□□ 0.25
Sox1P53783 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sox1P53783 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Sox1P53783 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sox1P53783 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sox1P53783 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sox1P53783 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox1P53783 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.59■□□□□ 0.25
Sox1P53783 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox1P53783 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox1P53783 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sox1P53783 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox1P53783 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox1P53783 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox1P53783 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Sox1P53783 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox1P53783 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.58■□□□□ 0.24
Sox1P53783 Gm12151-201ENSMUST00000121374 290 ntBASIC16.58■□□□□ 0.24
Sox1P53783 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox1P53783 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox1P53783 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.58■□□□□ 0.24
Sox1P53783 Gm7653-201ENSMUST00000214567 508 ntBASIC16.58■□□□□ 0.24
Sox1P53783 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.58■□□□□ 0.24
Sox1P53783 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox1P53783 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.58■□□□□ 0.24
Sox1P53783 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox1P53783 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox1P53783 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox1P53783 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox1P53783 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox1P53783 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox1P53783 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox1P53783 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox1P53783 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox1P53783 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox1P53783 Mir449b-201ENSMUST00000104833 80 ntBASIC16.57■□□□□ 0.24
Sox1P53783 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sox1P53783 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sox1P53783 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Sox1P53783 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox1P53783 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox1P53783 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox1P53783 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.57■□□□□ 0.24
Sox1P53783 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox1P53783 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sox1P53783 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox1P53783 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox1P53783 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms