Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Nkx2-1P50220 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-1P50220 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-1P50220 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.55□□□□□ -0.24
Nkx2-1P50220 Gm20049-201ENSMUST00000219950 730 ntBASIC13.55□□□□□ -0.24
Nkx2-1P50220 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Nkx2-1P50220 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-1P50220 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Gm11249-201ENSMUST00000117071 859 ntBASIC13.54□□□□□ -0.24
Nkx2-1P50220 Gm13158-201ENSMUST00000122007 736 ntBASIC13.54□□□□□ -0.24
Nkx2-1P50220 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx2-1P50220 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.53□□□□□ -0.24
Nkx2-1P50220 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Gm24841-201ENSMUST00000158676 357 ntBASIC13.53□□□□□ -0.24
Nkx2-1P50220 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Gm17661-201ENSMUST00000170317 270 ntBASIC13.53□□□□□ -0.24
Nkx2-1P50220 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx2-1P50220 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms