Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdc2P43407 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc2P43407 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc2P43407 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc2P43407 Gm16061-201ENSMUST00000122167 857 ntBASIC18.3■□□□□ 0.52
Sdc2P43407 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc2P43407 Gm37055-201ENSMUST00000191866 133 ntBASIC18.3■□□□□ 0.52
Sdc2P43407 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.3■□□□□ 0.52
Sdc2P43407 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc2P43407 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc2P43407 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc2P43407 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sdc2P43407 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc2P43407 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc2P43407 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sdc2P43407 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc2P43407 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.3■□□□□ 0.52
Sdc2P43407 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sdc2P43407 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc2P43407 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc2P43407 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc2P43407 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc2P43407 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc2P43407 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc2P43407 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc2P43407 Gm13474-201ENSMUST00000122466 815 ntBASIC18.29■□□□□ 0.52
Sdc2P43407 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sdc2P43407 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc2P43407 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc2P43407 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc2P43407 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.29■□□□□ 0.52
Sdc2P43407 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc2P43407 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdc2P43407 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sdc2P43407 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.28■□□□□ 0.52
Sdc2P43407 Gm13436-201ENSMUST00000120418 567 ntBASIC18.28■□□□□ 0.52
Sdc2P43407 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.28■□□□□ 0.52
Sdc2P43407 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.28■□□□□ 0.52
Sdc2P43407 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.28■□□□□ 0.52
Sdc2P43407 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.28■□□□□ 0.52
Sdc2P43407 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.28■□□□□ 0.52
Sdc2P43407 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sdc2P43407 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.28■□□□□ 0.52
Sdc2P43407 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sdc2P43407 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdc2P43407 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Sdc2P43407 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.27■□□□□ 0.52
Sdc2P43407 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sdc2P43407 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdc2P43407 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Sdc2P43407 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sdc2P43407 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.27■□□□□ 0.52
Sdc2P43407 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.27■□□□□ 0.52
Sdc2P43407 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.27■□□□□ 0.52
Sdc2P43407 Gm18421-201ENSMUST00000204122 625 ntBASIC18.27■□□□□ 0.52
Sdc2P43407 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sdc2P43407 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sdc2P43407 Gm7213-201ENSMUST00000215977 950 ntBASIC18.27■□□□□ 0.52
Sdc2P43407 Gm10566-201ENSMUST00000086739 996 ntBASIC18.27■□□□□ 0.52
Sdc2P43407 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sdc2P43407 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sdc2P43407 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sdc2P43407 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.27■□□□□ 0.52
Sdc2P43407 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdc2P43407 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdc2P43407 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdc2P43407 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdc2P43407 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdc2P43407 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sdc2P43407 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc2P43407 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc2P43407 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc2P43407 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sdc2P43407 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sdc2P43407 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.26■□□□□ 0.51
Sdc2P43407 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc2P43407 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc2P43407 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc2P43407 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sdc2P43407 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.26■□□□□ 0.51
Sdc2P43407 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms