Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh2P43247 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msh2P43247 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Msh2P43247 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Msh2P43247 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Msh2P43247 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Msh2P43247 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Msh2P43247 Gm7889-201ENSMUST00000185591 958 ntBASIC16.81■□□□□ 0.28
Msh2P43247 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.81■□□□□ 0.28
Msh2P43247 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.81■□□□□ 0.28
Msh2P43247 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Msh2P43247 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msh2P43247 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Msh2P43247 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Msh2P43247 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.8■□□□□ 0.28
Msh2P43247 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Msh2P43247 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Gm6433-201ENSMUST00000118634 875 ntBASIC16.8■□□□□ 0.28
Msh2P43247 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Msh2P43247 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.8■□□□□ 0.28
Msh2P43247 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.8■□□□□ 0.28
Msh2P43247 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Msh2P43247 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.8■□□□□ 0.28
Msh2P43247 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.8■□□□□ 0.28
Msh2P43247 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Msh2P43247 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Msh2P43247 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msh2P43247 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.8■□□□□ 0.28
Msh2P43247 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Msh2P43247 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Prob1-201ENSMUST00000097619 3021 ntBASIC16.79■□□□□ 0.28
Msh2P43247 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.79■□□□□ 0.28
Msh2P43247 Gm2274-201ENSMUST00000184539 609 ntBASIC16.79■□□□□ 0.28
Msh2P43247 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.79■□□□□ 0.28
Msh2P43247 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.79■□□□□ 0.28
Msh2P43247 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Msh2P43247 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.79■□□□□ 0.28
Msh2P43247 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Msh2P43247 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh2P43247 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Msh2P43247 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh2P43247 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.78■□□□□ 0.28
Msh2P43247 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.78■□□□□ 0.28
Msh2P43247 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh2P43247 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Msh2P43247 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Msh2P43247 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh2P43247 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh2P43247 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Msh2P43247 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh2P43247 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Msh2P43247 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms