Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Gm45328-201ENSMUST00000210942 917 ntBASIC14.95□□□□□ -0.02
Nkx2-2P42586 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.94□□□□□ -0.02
Nkx2-2P42586 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-2P42586 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-2P42586 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.92□□□□□ -0.02
Nkx2-2P42586 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-2P42586 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-2P42586 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms