Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx1-2P42580 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx1-2P42580 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.04■□□□□ 0.8
Nkx1-2P42580 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nkx1-2P42580 App-207ENSMUST00000227737 2827 ntBASIC20.04■□□□□ 0.8
Nkx1-2P42580 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-2P42580 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.04■□□□□ 0.8
Nkx1-2P42580 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.04■□□□□ 0.8
Nkx1-2P42580 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Gm10566-201ENSMUST00000086739 996 ntBASIC20.04■□□□□ 0.8
Nkx1-2P42580 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nkx1-2P42580 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Gm13559-201ENSMUST00000120476 863 ntBASIC20.03■□□□□ 0.8
Nkx1-2P42580 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Gm2274-201ENSMUST00000184539 609 ntBASIC20.03■□□□□ 0.8
Nkx1-2P42580 Gm44450-201ENSMUST00000199528 114 ntBASIC20.03■□□□□ 0.8
Nkx1-2P42580 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx1-2P42580 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Gm18115-201ENSMUST00000221209 621 ntBASIC20.02■□□□□ 0.8
Nkx1-2P42580 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx1-2P42580 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nkx1-2P42580 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Nkx1-2P42580 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx1-2P42580 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx1-2P42580 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx1-2P42580 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20■□□□□ 0.79
Nkx1-2P42580 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nkx1-2P42580 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx1-2P42580 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms