Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Sox6P40645 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox6P40645 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox6P40645 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox6P40645 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sox6P40645 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Sox6P40645 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox6P40645 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sox6P40645 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sox6P40645 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sox6P40645 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox6P40645 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox6P40645 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox6P40645 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox6P40645 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sox6P40645 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.32■□□□□ 0.04
Sox6P40645 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sox6P40645 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sox6P40645 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sox6P40645 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sox6P40645 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sox6P40645 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.32■□□□□ 0.04
Sox6P40645 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox6P40645 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox6P40645 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox6P40645 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Sox6P40645 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox6P40645 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sox6P40645 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox6P40645 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox6P40645 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox6P40645 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.31■□□□□ 0.04
Sox6P40645 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox6P40645 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox6P40645 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox6P40645 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox6P40645 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sox6P40645 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.3■□□□□ 0.04
Sox6P40645 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Sox6P40645 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.3■□□□□ 0.04
Sox6P40645 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.3■□□□□ 0.04
Sox6P40645 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sox6P40645 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.3■□□□□ 0.04
Sox6P40645 Il3ra-202ENSMUST00000223589 738 ntBASIC15.3■□□□□ 0.04
Sox6P40645 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Sox6P40645 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sox6P40645 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox6P40645 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
Sox6P40645 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox6P40645 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sox6P40645 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sox6P40645 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Sox6P40645 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sox6P40645 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Sox6P40645 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.29■□□□□ 0.04
Sox6P40645 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.29■□□□□ 0.04
Sox6P40645 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.29■□□□□ 0.04
Sox6P40645 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.29■□□□□ 0.04
Sox6P40645 Gm7791-201ENSMUST00000219066 539 ntBASIC15.29■□□□□ 0.04
Sox6P40645 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sox6P40645 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sox6P40645 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms